TAP HD-Zip_IV in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

Homeobox
START
MEKHLA

(Domain names are clickable)



List of proteins (17)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0050s0122.1.ppacid=28917030 transcript=Cagra.0050s0122.1 locus=Cagra.0050s0122 ID=Cagra.0050s0122.1.v1.1 annot-version=v1.1
Cagra.0094s0026.1.ppacid=28912401 transcript=Cagra.0094s0026.1 locus=Cagra.0094s0026 ID=Cagra.0094s0026.1.v1.1 annot-version=v1.1
Cagra.0288s0001.1.ppacid=28902580 transcript=Cagra.0288s0001.1 locus=Cagra.0288s0001 ID=Cagra.0288s0001.1.v1.1 annot-version=v1.1
Cagra.0352s0025.1.ppacid=28897282 transcript=Cagra.0352s0025.1 locus=Cagra.0352s0025 ID=Cagra.0352s0025.1.v1.1 annot-version=v1.1
Cagra.0751s0009.1.ppacid=28899586 transcript=Cagra.0751s0009.1 locus=Cagra.0751s0009 ID=Cagra.0751s0009.1.v1.1 annot-version=v1.1
Cagra.1671s0144.1.ppacid=28914074 transcript=Cagra.1671s0144.1 locus=Cagra.1671s0144 ID=Cagra.1671s0144.1.v1.1 annot-version=v1.1
Cagra.2098s0060.1.ppacid=28919582 transcript=Cagra.2098s0060.1 locus=Cagra.2098s0060 ID=Cagra.2098s0060.1.v1.1 annot-version=v1.1
Cagra.2175s0023.1.ppacid=28895785 transcript=Cagra.2175s0023.1 locus=Cagra.2175s0023 ID=Cagra.2175s0023.1.v1.1 annot-version=v1.1
Cagra.23907s0014.1.ppacid=28913574 transcript=Cagra.23907s0014.1 locus=Cagra.23907s0014 ID=Cagra.23907s0014.1.v1.1 annot-version=v1.1
Cagra.3356s0062.1.ppacid=28898164 transcript=Cagra.3356s0062.1 locus=Cagra.3356s0062 ID=Cagra.3356s0062.1.v1.1 annot-version=v1.1
Cagra.3373s0039.1.ppacid=28894171 transcript=Cagra.3373s0039.1 locus=Cagra.3373s0039 ID=Cagra.3373s0039.1.v1.1 annot-version=v1.1
Cagra.3519s0026.1.ppacid=28893872 transcript=Cagra.3519s0026.1 locus=Cagra.3519s0026 ID=Cagra.3519s0026.1.v1.1 annot-version=v1.1
Cagra.4849s0002.1.ppacid=28898031 transcript=Cagra.4849s0002.1 locus=Cagra.4849s0002 ID=Cagra.4849s0002.1.v1.1 annot-version=v1.1
Cagra.4894s0014.1.ppacid=28894901 transcript=Cagra.4894s0014.1 locus=Cagra.4894s0014 ID=Cagra.4894s0014.1.v1.1 annot-version=v1.1
Cagra.5070s0005.1.ppacid=28901587 transcript=Cagra.5070s0005.1 locus=Cagra.5070s0005 ID=Cagra.5070s0005.1.v1.1 annot-version=v1.1
Cagra.6571s0007.1.ppacid=28898501 transcript=Cagra.6571s0007.1 locus=Cagra.6571s0007 ID=Cagra.6571s0007.1.v1.1 annot-version=v1.1
Cagra.6594s0010.1.ppacid=28900877 transcript=Cagra.6594s0010.1 locus=Cagra.6594s0010 ID=Cagra.6594s0010.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum